Keeping Payroll Compliant: W-2 vs. 1099 Employees

As a dental practice owner, staffing decisions go far beyond who to hire — they also include how to properly classify your team for tax and payroll purposes. One common question we hear from dentists is: 

“Should this person be a W-2 employee or a 1099 contractor?” 

The answer depends on how the work is structured — and understanding the difference can help you build a stronger, more efficient team while keeping your practice in good standing. 

 

W-2 vs. 1099: What’s the Real Difference? 

At a glance, here’s how the two classifications compare: 

  W-2 Employee  1099 Contractor 
Work Control  You control how, when, and where work is done  They control how and when work is done 
Tools Provided  You provide tools, software, and systems  They use their own tools and processes 
Exclusivity  Usually works only for your practice  Often works with multiple clients 
Tax Withholding  You withhold payroll taxes and issue a W-2  They handle their own taxes and get a 1099 
Benefits  May be eligible for benefits you offer  Not eligible for employee benefits 

 

 

Why This Matters for Dental Practices 

In a dental office, most team members — from dental assistants to office managers — will fall into the W-2 category, because you control their schedule, provide their tools, and they’re integrated into your day-to-day operations. 

Even if someone is working fewer hours, or remotely in a limited role (like handling billing), they’re likely still considered a W-2 employee if: 

  • You determine their responsibilities and hours 
  • They only work for your practice 
  • They use your systems or tools to do the job 

Shifting hours or location doesn’t automatically change their classification. 

 

When a 1099 Contractor Makes Sense 

In some cases, bringing in a 1099 contractor is the right move — especially when the work is project-based or specialized. For example: 

  • Outsourced billing or bookkeeping 
  • IT and software support 
  • Marketing or website services 
  • Temporary or locum tenens dental providers 
  • Specialists selectively working in a general practice office 

These professionals typically run their own business, offer services to multiple clients, and manage their own schedules and tools. 

 

Questions to Ask Before Deciding 

To determine the right classification, ask yourself: 

  • Who controls how the work gets done? 
  • Does this person use our tools or their own? 
  • Are they working only for us or serving other clients, too? 
  • Are we setting their hours or are they setting their own schedule? 

If you’re answering “yes” to most of the first set of questions, W-2 is likely the right path. 

 

How to Set Things Up the Right Way 

If you’re creating a new role or updating an existing one, here’s how to ensure everything is structured clearly: 

  • Create a written role description or contract
    This helps clarify duties, expectations, hours, and communication processes. 
  • Use the correct payroll process
    Whether you’re running payroll in-house or through a provider, make sure the classification matches how the work is structured. 
  • Maintain consistency
    If someone is truly a contractor, treat them like one — don’t manage their day-to-day tasks the same way you would with an employee. 

 

The Bottom Line 

Understanding the difference between W-2 and 1099 classification helps you build a team that works for your practice — operationally and legally. When you set roles up correctly from the start, you reduce confusion, simplify payroll, and give everyone clarity about their responsibilities. 

Need help reviewing your team structure or drafting clear role descriptions? We’re here to help you get it right — and keep it simple.